BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004F06LP1|AL425275
(871 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1788 1719 0.0
>3x_Contig1788
Length = 28493
Score = 1719 bits (865), Expect = 0.0
Identities = 868/871 (99%)
Strand = Plus / Plus
Query: 1 atccagagtcagacgacacatacgaatgatggatgtgctggtactttgggggagcgttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9247 atccagagtcagacgacacatacgaatgatggatgtgctggtactttgggggagcgttgt 9306
Query: 61 caaaatcttcctgttcttcatcgctatcgctatcgctatattcatcgtcatcagcttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9307 caaaatcttcctgttcttcatcgctatcgctatcgctatattcatcgtcatcagcttctt 9366
Query: 121 cttcgttgtaatggtagtcatttgatgaacttctggagacgatatcgtcgaatttggcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9367 cttcgttgtaatggtagtcatttgatgaacttctggagacgatatcgtcgaatttggcta 9426
Query: 181 ctgaagaggagagtctatcgagtaaattagcatggcctactagaattctcaaatcatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9427 ctgaagaggagagtctatcgagtaaattagcatggcctactagaattctcaaatcatgat 9486
Query: 241 ctcttccactgtttttatttgctgcggctagtagcttgcctttagcccttgaggcaagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9487 ctcttccactgtttttatttgctgcggctagtagcttgcctttagcccttgaggcaagca 9546
Query: 301 tatattgttgtgacagacttaatatggtagccattttttttttagtatgttctttttggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9547 tatattgttgtgacagacttaatatggtagccattttttttttagtatgttctttttggt 9606
Query: 361 ggcagttatctgtccttaatacagtaaaasttaattcgctctggagtaccgttttgatgt 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9607 ggcagttatctgtccttaatacagtaaaagttaattcgctctggagtaccgttttgatgt 9666
Query: 421 cgttgactataactaatgacgttactatggggcgtcaacagataatctcagccagtgtca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9667 cgttgactataactaatgacgttactatggggcgtcaacagataatctcagccagtgtca 9726
Query: 481 gataatatttacacccacccgacatacatatatatatatataastaaagacgtgacaaag 540
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 9727 gataatatttacacccacccgacatacatatatatatatataagtaaagacgtgacaaag 9786
Query: 541 caattcagatatacgtggatatttgataaggcccgcaaagtatccgaagcgttttataac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9787 caattcagatatacgtggatatttgataaggcccgcaaagtatccgaagcgttttataac 9846
Query: 601 cacctttgacacatctcaaaacgataaacttctcagctttgtaaaacttaaaacccgttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9847 cacctttgacacatctcaaaacgataaacttctcagctttgtaaaacttaaaacccgttc 9906
Query: 661 ctgagatgagccattattattacaaatgctttttttgcattagtgtcgctcgaacttgca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9907 ctgagatgagccattattattacaaatgctttttttgcattagtgtcgctcgaacttgca 9966
Query: 721 cctagcacaaaacaccaaacacatatttttcggcattttcccctttccattttgacaaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9967 cctagcacaaaacaccaaacacatatttttcggcattttcccctttccattttgacaaat 10026
Query: 781 gcaatccaaagtacataccatgaaactgacaaatgcacaaaaaagcactcaacttcctca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10027 gcaatccaaagtacataccatgaaactgacaaatgcacaaaaaagcactcaacttcctca 10086
Query: 841 caaaaccaagcaacgaactccsagccattct 871
||||||||||||||||||||| |||||||||
Sbjct: 10087 caaaaccaagcaacgaactccgagccattct 10117
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,170
Number of Sequences: 1807
Number of extensions: 11170
Number of successful extensions: 1081
Number of sequences better than 1.0e-20: 1
length of query: 871
length of database: 10,358,551
effective HSP length: 16
effective length of query: 855
effective length of database: 10,329,639
effective search space: 8831841345
effective search space used: 8831841345
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)